Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421854_101121 | Not Available | Negative | 107996 - 108676 | 24915.1 |
| hypothetical protein | SAMN05421854_101122 | Not Available | Positive | 109249 - 109350 | 3674.56 |
| dna-directed rna polymerase subunit beta' | SAMN05421854_101123 | Not Available | Negative | 109411 - 113322 | 144078.0 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 115573 - 115662 | 18.01 |
| dna-directed rna polymerase subunit beta | SAMN05421854_101124 | Not Available | Negative | 113411 - 116914 | 129147.0 |
| chorismate mutase | SAMN05421854_101125 | Not Available | Positive | 117635 - 118081 | 16093.3 |
| mce-associated membrane protein | SAMN05421854_101126 | Not Available | Negative | 118142 - 119218 | 38040.7 |
| mce-associated membrane protein | SAMN05421854_101127 | Not Available | Negative | 119245 - 119853 | 21625.5 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN05421854_101128 | Not Available | Negative | 119890 - 121152 | 44119.3 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN05421854_101129 | Not Available | Negative | 121152 - 122384 | 42321.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
