Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN05421854_1011554 | Not Available | Positive | 1554720 - 1555622 | 30896.2 |
| pantoate--beta-alanine ligase | SAMN05421854_1011555 | Not Available | Positive | 1555619 - 1556527 | 32424.8 |
| l-aspartate 1-decarboxylase | SAMN05421854_1011556 | Not Available | Positive | 1556540 - 1557034 | 17732.9 |
| type iii pantothenate kinase | SAMN05421854_1011557 | Not Available | Positive | 1557078 - 1557851 | 27267.2 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN05421854_1011558 | Not Available | Negative | 1557848 - 1558582 | 25464.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421854_1011559 | Not Available | Positive | 1558713 - 1559567 | 30482.8 |
| quaternary ammonium compound-resistance protein suge | SAMN05421854_1011560 | Not Available | Negative | 1559571 - 1559885 | 10751.6 |
| methyltransferase domain-containing protein | SAMN05421854_1011562 | Not Available | Negative | 1560031 - 1560795 | 27645.5 |
| lysyl-trna synthetase, class ii | SAMN05421854_1011563 | Not Available | Positive | 1560872 - 1562386 | 56067.7 |
| lsr2 protein | SAMN05421854_1011564 | Not Available | Positive | 1562549 - 1562902 | 12843.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
