Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| espg family protein | SAMN05421854_1011544 | Not Available | Positive | 1543745 - 1544566 | 29764.3 |
| cell division protease ftsh | SAMN05421854_1011545 | Not Available | Positive | 1544773 - 1547175 | 86215.6 |
| gtp cyclohydrolase i | SAMN05421854_1011546 | Not Available | Positive | 1547147 - 1547761 | 22713.2 |
| dihydropteroate synthase | SAMN05421854_1011547 | Not Available | Positive | 1547758 - 1548594 | 28998.3 |
| dihydroneopterin aldolase | SAMN05421854_1011548 | Not Available | Positive | 1548587 - 1548946 | 12997.4 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase | SAMN05421854_1011549 | Not Available | Positive | 1548943 - 1549437 | 17750.1 |
| dna-binding transcriptional regulator, merr family | SAMN05421854_1011550 | Not Available | Negative | 1549470 - 1550417 | 35363.9 |
| protein of unknown function | SAMN05421854_1011551 | Not Available | Positive | 1550479 - 1550931 | 15515.0 |
| hypothetical protein | SAMN05421854_1011552 | Not Available | Positive | 1551001 - 1552893 | 67601.7 |
| membrane proteinase prsw, cleaves anti-sigma factor rsiw, m82 family | SAMN05421854_1011553 | Not Available | Positive | 1553354 - 1554460 | 39813.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
