Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein | SAMN05421854_1011534 | Not Available | Negative | 1531867 - 1532274 | 14922.5 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05421854_1011535 | Not Available | Positive | 1532479 - 1534128 | 57323.7 |
| inorganic pyrophosphatase | SAMN05421854_1011536 | Not Available | Negative | 1534186 - 1534704 | 19815.3 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN05421854_1011537 | Not Available | Positive | 1534877 - 1537768 | 97801.2 |
| putative hydrolase/uncharacterized protein, coenzyme f420 biosynthesis associated | SAMN05421854_1011538 | Not Available | Positive | 1537878 - 1538894 | 36282.7 |
| trna(ile)-lysidine synthase | SAMN05421854_1011539 | Not Available | Positive | 1538891 - 1539862 | 34385.2 |
| hypoxanthine phosphoribosyltransferase | SAMN05421854_1011540 | Not Available | Positive | 1539866 - 1540420 | 20074.2 |
| hypothetical protein | SAMN05421854_1011541 | Not Available | Positive | 1540592 - 1540960 | 12532.7 |
| hypothetical protein | SAMN05421854_1011542 | Not Available | Positive | 1540984 - 1542399 | 45358.2 |
| espg family protein | SAMN05421854_1011543 | Not Available | Positive | 1542479 - 1543282 | 28418.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
