Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| activator of hsp90 atpase homolog 1-like protein | SAMN05421854_1011523 | Not Available | Negative | 1525754 - 1525945 | 6751.9 |
| hypothetical protein | SAMN05421854_1011524 | Not Available | Negative | 1525942 - 1526121 | 6285.21 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05421854_1011525 | Not Available | Positive | 1526207 - 1526638 | 15682.2 |
| dna-binding transcriptional regulator, arsr family | SAMN05421854_1011526 | Not Available | Positive | 1526628 - 1526963 | 11921.3 |
| hypothetical protein | SAMN05421854_1011527 | Not Available | Positive | 1527066 - 1527512 | 15519.2 |
| transcription elongation factor, grea/greb family | SAMN05421854_1011528 | Not Available | Negative | 1527560 - 1528018 | 16144.6 |
| transcriptional regulator, tetr family | SAMN05421854_1011529 | Not Available | Positive | 1528141 - 1528728 | 21541.0 |
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN05421854_1011530 | Not Available | Positive | 1528748 - 1529266 | 18264.7 |
| glycine hydroxymethyltransferase | SAMN05421854_1011532 | Not Available | Positive | 1529425 - 1530693 | 44898.1 |
| rna polymerase sigma factor, sigma-70 family | SAMN05421854_1011533 | Not Available | Negative | 1530734 - 1531870 | 41031.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
