Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN05421854_1011513 | Not Available | Positive | 1514784 - 1515932 | 38265.4 |
| espg family protein | SAMN05421854_1011514 | Not Available | Positive | 1516011 - 1516847 | 29829.4 |
| hypothetical protein | SAMN05421854_1011515 | Not Available | Positive | 1517685 - 1518275 | 21034.4 |
| dtmp kinase | SAMN05421854_1011516 | Not Available | Positive | 1518424 - 1520553 | 74972.8 |
| dna polymerase-3 subunit delta' | SAMN05421854_1011517 | Not Available | Positive | 1520550 - 1521749 | 42078.1 |
| hypothetical protein | SAMN05421854_1011518 | Not Available | Negative | 1521845 - 1523533 | 57179.8 |
| Trna-thr | Not Available | Not Available | Positive | 1523664 - 1523737 | Not Available |
| hypothetical protein | SAMN05421854_1011520 | Not Available | Negative | 1523816 - 1524091 | 9603.47 |
| dna-binding transcriptional regulator, acrr family | SAMN05421854_1011521 | Not Available | Negative | 1524369 - 1524959 | 21839.0 |
| short-chain dehydrogenase | SAMN05421854_1011522 | Not Available | Positive | 1525047 - 1525748 | 24187.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
