Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421854_1011503 | Not Available | Positive | 1500530 - 1500868 | 11152.3 |
| helicase/secretion neighborhood tade-like protein | SAMN05421854_1011504 | Not Available | Positive | 1500865 - 1501227 | 12396.9 |
| bifunctional dna primase/polymerase, n-terminal | SAMN05421854_1011505 | Not Available | Positive | 1502373 - 1502993 | 22959.3 |
| dead/deah box helicase domain-containing protein | SAMN05421854_1011506 | Not Available | Negative | 1503042 - 1505867 | 97080.0 |
| k(+)-stimulated pyrophosphate-energized sodium pump | SAMN05421854_1011507 | Not Available | Positive | 1506120 - 1508405 | 77142.3 |
| hypothetical protein | SAMN05421854_1011508 | Not Available | Positive | 1508543 - 1509130 | 19599.2 |
| nucleotidyltransferase domain-containing protein | SAMN05421854_1011509 | Not Available | Negative | 1509097 - 1509858 | 27717.7 |
| hypothetical protein | SAMN05421854_1011510 | Not Available | Positive | 1509952 - 1510671 | 25140.2 |
| trypsin-like peptidase domain-containing protein | SAMN05421854_1011511 | Not Available | Negative | 1510724 - 1511539 | 28665.6 |
| dna topoisomerase-1 | SAMN05421854_1011512 | Not Available | Positive | 1511846 - 1514722 | 105026.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
