Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, rpir family | SAMN05421854_1011492 | Not Available | Negative | 1488254 - 1489141 | 31066.0 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421854_1011493 | Not Available | Negative | 1489467 - 1491218 | 62430.6 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN05421854_1011494 | Not Available | Negative | 1491230 - 1492501 | 45490.5 |
| beta-n-acetylhexosaminidase | SAMN05421854_1011495 | Not Available | Negative | 1492498 - 1494330 | 63970.2 |
| had-superfamily subfamily ib hydrolase, tigr01490 | SAMN05421854_1011496 | Not Available | Negative | 1494928 - 1495749 | 29331.8 |
| helicase/secretion neighborhood cpae-like protein | SAMN05421854_1011498 | Not Available | Positive | 1496439 - 1497497 | 35939.3 |
| pilus assembly protein cpaf | SAMN05421854_1011499 | Not Available | Positive | 1497498 - 1498649 | 40853.2 |
| tight adherence protein b | SAMN05421854_1011500 | Not Available | Positive | 1498891 - 1499643 | 26315.2 |
| type ii secretion system (t2ss), protein f | SAMN05421854_1011501 | Not Available | Positive | 1499640 - 1500335 | 24052.5 |
| protein of unknown function | SAMN05421854_1011502 | Not Available | Positive | 1500366 - 1500530 | 5414.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
