Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxybutyrate dehydrogenase | SAMN05421854_1011482 | Not Available | Positive | 1478654 - 1479403 | 25500.6 |
| metabolite-proton symporter | SAMN05421854_1011483 | Not Available | Positive | 1479438 - 1480745 | 46119.9 |
| sugar diacid utilization regulator | SAMN05421854_1011484 | Not Available | Positive | 1480742 - 1482562 | 63521.8 |
| transcriptional regulator, tetr family | SAMN05421854_1011485 | Not Available | Negative | 1482547 - 1483116 | 20782.0 |
| predicted oxidoreductase | SAMN05421854_1011486 | Not Available | Positive | 1483205 - 1484080 | 30605.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421854_1011487 | Not Available | Negative | 1484083 - 1484961 | 31697.7 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05421854_1011488 | Not Available | Positive | 1485033 - 1485485 | 16722.9 |
| hypothetical protein | SAMN05421854_1011489 | Not Available | Negative | 1485547 - 1486125 | 20974.9 |
| high-affinity nickel-transport protein | SAMN05421854_1011490 | Not Available | Negative | 1486142 - 1487218 | 38253.3 |
| n-acetylmuramic acid 6-phosphate etherase | SAMN05421854_1011491 | Not Available | Negative | 1487308 - 1488234 | 31718.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
