Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative holin-x, holin superfamily iii | SAMN05421854_1011472 | Not Available | Negative | 1468998 - 1469495 | 18029.7 |
| na+:h+ antiporter, nhaa family | SAMN05421854_1011473 | Not Available | Negative | 1469555 - 1470739 | 41108.0 |
| proton-dependent oligopeptide transporter, pot family | SAMN05421854_1011474 | Not Available | Positive | 1471027 - 1472484 | 51271.6 |
| predicted fe2+/mn2+ transporter, vit1/ccc1 family | SAMN05421854_1011475 | Not Available | Negative | 1472481 - 1473191 | 24558.5 |
| cupin domain-containing protein | SAMN05421854_1011476 | Not Available | Positive | 1473325 - 1473663 | 12392.7 |
| hypothetical protein | SAMN05421854_1011477 | Not Available | Negative | 1473727 - 1474242 | 17332.9 |
| acetyl-coa synthetase | SAMN05421854_1011478 | Not Available | Negative | 1474380 - 1476359 | 72098.7 |
| protein n-acetyltransferase, rimj/riml family | SAMN05421854_1011479 | Not Available | Negative | 1476478 - 1477056 | 21568.6 |
| hypothetical protein | SAMN05421854_1011480 | Not Available | Positive | 1477169 - 1477666 | 18272.0 |
| hypothetical protein | SAMN05421854_1011481 | Not Available | Positive | 1477749 - 1478471 | 24702.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
