Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-3 subunit beta | SAMN05421854_1011462 | Not Available | Negative | 1459079 - 1460176 | 38953.8 |
| predicted arabinose efflux permease, mfs family | SAMN05421854_1011463 | Not Available | Negative | 1460341 - 1461600 | 41974.9 |
| udp:flavonoid glycosyltransferase yjic, ydhe family | SAMN05421854_1011464 | Not Available | Positive | 1461693 - 1462850 | 40610.6 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421854_1011465 | Not Available | Negative | 1463271 - 1463945 | 24876.9 |
| hypothetical protein | SAMN05421854_1011466 | Not Available | Negative | 1464105 - 1464356 | 9723.12 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN05421854_1011467 | Not Available | Positive | 1464594 - 1465277 | 25037.3 |
| thiol-disulfide isomerase or thioredoxin | SAMN05421854_1011468 | Not Available | Positive | 1465274 - 1465876 | 20355.4 |
| nudix domain-containing protein | SAMN05421854_1011469 | Not Available | Positive | 1465873 - 1466589 | 25318.7 |
| colicin v production protein | SAMN05421854_1011470 | Not Available | Positive | 1466597 - 1467781 | 40474.0 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421854_1011471 | Not Available | Negative | 1468061 - 1468981 | 33650.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
