Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin, ohr subfamily | SAMN05421854_1011442 | Not Available | Positive | 1441145 - 1441567 | 14465.1 |
| starvation-inducible dna-binding protein | SAMN05421854_1011443 | Not Available | Positive | 1441593 - 1442069 | 17293.3 |
| glutamate decarboxylase | SAMN05421854_1011444 | Not Available | Positive | 1442165 - 1443556 | 51823.6 |
| tigr03085 family protein | SAMN05421854_1011445 | Not Available | Positive | 1443585 - 1444211 | 22499.7 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN05421854_1011446 | Not Available | Negative | 1444251 - 1446098 | 66606.8 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN05421854_1011447 | Not Available | Positive | 1446138 - 1446881 | 26873.8 |
| Trna-pro | Not Available | Not Available | Positive | 1447070 - 1447143 | Not Available |
| predicted phosphohydrolase, mpp superfamily | SAMN05421854_1011449 | Not Available | Negative | 1447173 - 1448153 | 35162.3 |
| membrane carboxypeptidase (penicillin-binding protein) | SAMN05421854_1011450 | Not Available | Negative | 1448532 - 1450682 | 75299.1 |
| whib family transcriptional regulator, redox-sensing transcriptional regulator | SAMN05421854_1011451 | Not Available | Positive | 1451020 - 1451313 | 10665.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
