Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein deda, snare-associated domain | SAMN05421854_1011422 | Not Available | Negative | 1422368 - 1422928 | 19295.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421854_1011423 | Not Available | Positive | 1423083 - 1424000 | 33335.4 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05421854_1011424 | Not Available | Negative | 1424014 - 1424982 | 34913.9 |
| 2-isopropylmalate synthase | SAMN05421854_1011425 | Not Available | Negative | 1424993 - 1426777 | 66344.1 |
| hypothetical protein | SAMN05421854_1011426 | Not Available | Positive | 1427022 - 1427399 | 13587.6 |
| hypothetical protein | SAMN05421854_1011427 | Not Available | Negative | 1427619 - 1428284 | 22802.0 |
| hypothetical protein | SAMN05421854_1011428 | Not Available | Negative | 1428319 - 1428750 | 14941.6 |
| nitroreductase | SAMN05421854_1011429 | Not Available | Negative | 1429093 - 1429722 | 22778.2 |
| aspartate kinase | SAMN05421854_1011430 | Not Available | Positive | 1429920 - 1431185 | 44329.6 |
| aspartate-semialdehyde dehydrogenase | SAMN05421854_1011431 | Not Available | Positive | 1431185 - 1432225 | 36386.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
