Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | SAMN05421854_1011412 | Not Available | Negative | 1412688 - 1413110 | 15511.2 |
| uncharacterized conserved protein | SAMN05421854_1011413 | Not Available | Positive | 1413213 - 1413593 | 13791.4 |
| rna polymerase sigma factor, sigma-70 family | SAMN05421854_1011414 | Not Available | Positive | 1413590 - 1414801 | 43949.8 |
| membrane protein deda, snare-associated domain | SAMN05421854_1011415 | Not Available | Positive | 1414896 - 1415543 | 22786.5 |
| hypothetical protein | SAMN05421854_1011416 | Not Available | Positive | 1415929 - 1416576 | 25925.2 |
| type i restriction enzyme m protein | SAMN05421854_1011417 | Not Available | Positive | 1416573 - 1418792 | 80631.9 |
| o-acetylserine/cysteine efflux transporter | SAMN05421854_1011418 | Not Available | Negative | 1418795 - 1419694 | 31328.8 |
| dna-binding transcriptional regulator, lysr family | SAMN05421854_1011419 | Not Available | Positive | 1419781 - 1420686 | 32840.7 |
| regulatory protein, tetr family | SAMN05421854_1011420 | Not Available | Negative | 1420683 - 1421237 | 20700.8 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421854_1011421 | Not Available | Positive | 1421302 - 1422414 | 39959.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
