Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05421854_1011402 | Not Available | Positive | 1401352 - 1402635 | 44063.0 |
| hypothetical protein | SAMN05421854_1011403 | Not Available | Positive | 1402719 - 1404686 | 69546.5 |
| glycosyl transferase family 2 | SAMN05421854_1011404 | Not Available | Positive | 1404693 - 1405436 | 26022.7 |
| hypothetical protein | SAMN05421854_1011405 | Not Available | Positive | 1405448 - 1405885 | 16024.8 |
| hypothetical protein | SAMN05421854_1011406 | Not Available | Positive | 1405930 - 1406406 | 17320.4 |
| peptide/nickel transport system substrate-binding protein | SAMN05421854_1011407 | Not Available | Positive | 1406832 - 1408508 | 60618.6 |
| peptide/nickel transport system permease protein | SAMN05421854_1011408 | Not Available | Positive | 1408596 - 1409597 | 36124.4 |
| peptide/nickel transport system permease protein | SAMN05421854_1011409 | Not Available | Positive | 1409594 - 1410529 | 32951.4 |
| peptide/nickel transport system atp-binding protein | SAMN05421854_1011410 | Not Available | Positive | 1410534 - 1411529 | 36049.9 |
| peptide/nickel transport system atp-binding protein | SAMN05421854_1011411 | Not Available | Positive | 1411526 - 1412638 | 40597.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
