Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421854_1011391 | Not Available | Positive | 1389572 - 1389991 | 14449.4 |
| hypothetical protein | SAMN05421854_1011392 | Not Available | Positive | 1389995 - 1390489 | 17670.3 |
| hypothetical protein | SAMN05421854_1011394 | Not Available | Negative | 1390669 - 1391544 | 31290.6 |
| dna polymerase-3 subunit gamma/tau | SAMN05421854_1011395 | Not Available | Positive | 1391566 - 1393626 | 71836.0 |
| carbohydrate binding module (family 6) | SAMN05421854_1011396 | Not Available | Negative | 1393670 - 1396774 | 110277.0 |
| n-acetylmuramoyl-l-alanine amidase | SAMN05421854_1011397 | Not Available | Negative | 1396880 - 1397548 | 22668.5 |
| hypothetical protein | SAMN05421854_1011398 | Not Available | Positive | 1397838 - 1398194 | 11837.1 |
| dna replication and repair protein recr | SAMN05421854_1011399 | Not Available | Positive | 1398198 - 1398794 | 21776.4 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolysing) | SAMN05421854_1011400 | Not Available | Negative | 1399152 - 1400249 | 40869.4 |
| glycosyl transferase family 2 | SAMN05421854_1011401 | Not Available | Positive | 1400336 - 1401355 | 36788.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
