Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxybutyryl-coa dehydrogenase | SAMN05421854_1011381 | Not Available | Negative | 1378225 - 1379706 | 51941.6 |
| transcriptional regulator, tetr family | SAMN05421854_1011382 | Not Available | Negative | 1379789 - 1380469 | 24916.4 |
| deazaflavin-dependent oxidoreductase, nitroreductase family | SAMN05421854_1011383 | Not Available | Positive | 1380595 - 1381041 | 16762.2 |
| hypothetical protein | SAMN05421854_1011384 | Not Available | Negative | 1381043 - 1381243 | 7088.24 |
| hypothetical protein | SAMN05421854_1011385 | Not Available | Negative | 1381325 - 1381885 | 18252.1 |
| two-component system, ompr family, response regulator | SAMN05421854_1011386 | Not Available | Positive | 1382045 - 1382797 | 27407.0 |
| two-component system, ompr family, sensor kinase | SAMN05421854_1011387 | Not Available | Positive | 1382772 - 1384259 | 52556.5 |
| 4-amino-4-deoxy-l-arabinose transferase | SAMN05421854_1011388 | Not Available | Positive | 1384305 - 1386089 | 62570.3 |
| threonine dehydratase | SAMN05421854_1011389 | Not Available | Negative | 1386076 - 1386981 | 30464.6 |
| signal transduction histidine kinase | SAMN05421854_1011390 | Not Available | Positive | 1387242 - 1389575 | 80593.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
