Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421854_1011361 | Not Available | Negative | 1357077 - 1357370 | 10116.8 |
| taurine dioxygenase | SAMN05421854_1011362 | Not Available | Positive | 1357696 - 1358622 | 35108.4 |
| transcriptional regulator, tetr family | SAMN05421854_1011363 | Not Available | Negative | 1358625 - 1359188 | 20261.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421854_1011364 | Not Available | Positive | 1359282 - 1359959 | 23353.4 |
| poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) | SAMN05421854_1011365 | Not Available | Negative | 1360390 - 1361406 | 36063.9 |
| hypothetical protein | SAMN05421854_1011366 | Not Available | Positive | 1361532 - 1364033 | 86784.6 |
| hypothetical protein | SAMN05421854_1011367 | Not Available | Negative | 1364286 - 1364657 | 14066.6 |
| ftsk/spoiiie family protein | SAMN05421854_1011368 | Not Available | Negative | 1364654 - 1367404 | 98273.2 |
| hypothetical protein | SAMN05421854_1011369 | Not Available | Negative | 1367412 - 1367660 | 8730.24 |
| hypothetical protein | SAMN05421854_1011370 | Not Available | Negative | 1367666 - 1367926 | 8722.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
