Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l23 | SAMN05421854_101101 | Not Available | Negative | 89195 - 89506 | 11353.9 |
| large subunit ribosomal protein l4 | SAMN05421854_101102 | Not Available | Negative | 89503 - 90192 | 24473.3 |
| large subunit ribosomal protein l3 | SAMN05421854_101103 | Not Available | Negative | 90195 - 90845 | 22692.4 |
| ssu ribosomal protein s10p | SAMN05421854_101104 | Not Available | Negative | 90876 - 91181 | 11533.1 |
| elongation factor tu | SAMN05421854_101105 | Not Available | Negative | 91598 - 92791 | 43748.2 |
| elongation factor g | SAMN05421854_101106 | Not Available | Negative | 92919 - 95018 | 77117.2 |
| small subunit ribosomal protein s7 | SAMN05421854_101107 | Not Available | Negative | 95094 - 95564 | 17434.2 |
| ssu ribosomal protein s12p | SAMN05421854_101108 | Not Available | Negative | 95564 - 95938 | 13765.9 |
| hypothetical protein | SAMN05421854_101109 | Not Available | Negative | 96572 - 96724 | 5157.75 |
| n-acetylglutamate synthase, gnat family | SAMN05421854_101110 | Not Available | Positive | 96781 - 97287 | 18245.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
