Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421854_1011341 | Not Available | Positive | 1336400 - 1336867 | 17371.8 |
| putative tim-barrel protein, nifr3 family | SAMN05421854_1011342 | Not Available | Negative | 1336939 - 1338111 | 41823.1 |
| predicted membrane protein | SAMN05421854_1011343 | Not Available | Positive | 1338206 - 1340668 | 82666.9 |
| ppox class probable f420-dependent enzyme, rv3369 family | SAMN05421854_1011344 | Not Available | Positive | 1340852 - 1341253 | 14661.3 |
| superoxide dismutase, cu-zn family | SAMN05421854_1011345 | Not Available | Negative | 1341267 - 1341854 | 20006.3 |
| hypothetical protein | SAMN05421854_1011346 | Not Available | Positive | 1342321 - 1343376 | 35136.1 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05421854_1011347 | Not Available | Positive | 1343501 - 1345330 | 66986.2 |
| hypothetical protein | SAMN05421854_1011348 | Not Available | Positive | 1345713 - 1346603 | 31718.9 |
| lrp/asnc family transcriptional regulator, regulator for asna, asnc and gida | SAMN05421854_1011349 | Not Available | Negative | 1346958 - 1347455 | 18179.9 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN05421854_1011350 | Not Available | Positive | 1347648 - 1349174 | 53284.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
