Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate transport system permease protein | SAMN05421854_1011311 | Not Available | Positive | 1308537 - 1309604 | 37432.8 |
| phosphate transport system permease protein | SAMN05421854_1011312 | Not Available | Positive | 1309607 - 1310521 | 32572.0 |
| phosphate transport system atp-binding protein | SAMN05421854_1011313 | Not Available | Positive | 1310525 - 1311301 | 28214.0 |
| phosphate transport system protein | SAMN05421854_1011314 | Not Available | Negative | 1311416 - 1312090 | 24631.4 |
| transcriptional attenuator, lytr family | SAMN05421854_1011315 | Not Available | Negative | 1312175 - 1313548 | 50024.2 |
| hypothetical protein | SAMN05421854_1011316 | Not Available | Negative | 1314049 - 1314420 | 13504.0 |
| hypothetical protein | SAMN05421854_1011317 | Not Available | Positive | 1315436 - 1315891 | 15595.9 |
| hypothetical protein | SAMN05421854_1011318 | Not Available | Positive | 1315967 - 1316905 | 32996.7 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05421854_1011319 | Not Available | Negative | 1316726 - 1317370 | 23564.9 |
| isopentenyl-diphosphate delta-isomerase | SAMN05421854_1011320 | Not Available | Negative | 1317500 - 1318147 | 24386.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
