Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| drug resistance transporter, emrb/qaca subfamily | SAMN05421854_1011301 | Not Available | Negative | 1300436 - 1301770 | 45361.3 |
| protein of unknown function | SAMN05421854_1011302 | Not Available | Negative | 1301871 - 1302176 | 9935.52 |
| thiosulfate sulfurtransferase | SAMN05421854_1011303 | Not Available | Negative | 1302176 - 1303012 | 31372.3 |
| protein of unknown function | SAMN05421854_1011304 | Not Available | Negative | 1303041 - 1303475 | 15124.8 |
| hypothetical protein | SAMN05421854_1011305 | Not Available | Negative | 1303563 - 1303700 | 5021.24 |
| thiol-disulfide isomerase or thioredoxin | SAMN05421854_1011306 | Not Available | Negative | 1303954 - 1304388 | 15111.5 |
| protein of unknown function | SAMN05421854_1011307 | Not Available | Negative | 1304394 - 1305296 | 31787.8 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421854_1011308 | Not Available | Positive | 1305396 - 1306202 | 29478.5 |
| mycothiol synthase | SAMN05421854_1011309 | Not Available | Positive | 1306225 - 1307124 | 32323.9 |
| phosphate transport system substrate-binding protein | SAMN05421854_1011310 | Not Available | Positive | 1307365 - 1308495 | 37996.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
