Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421854_1011291 | Not Available | Negative | 1292946 - 1293128 | 7104.87 |
| hypothetical protein | SAMN05421854_1011292 | Not Available | Positive | 1293234 - 1294232 | 35760.1 |
| asparaginase | SAMN05421854_1011293 | Not Available | Negative | 1294213 - 1295157 | 32407.8 |
| hypothetical protein | SAMN05421854_1011294 | Not Available | Negative | 1295154 - 1295720 | 20439.9 |
| hypothetical protein | SAMN05421854_1011295 | Not Available | Negative | 1295770 - 1296891 | 40288.7 |
| 4-amino-4-deoxychorismate lyase | SAMN05421854_1011296 | Not Available | Positive | 1296923 - 1297768 | 30257.2 |
| hypothetical protein | SAMN05421854_1011297 | Not Available | Negative | 1297812 - 1298213 | 14244.1 |
| biotin-dependent carboxylase uncharacterized domain-containing protein | SAMN05421854_1011298 | Not Available | Negative | 1298216 - 1299076 | 28727.6 |
| sensor histidine kinase inhibitor, kipi family | SAMN05421854_1011299 | Not Available | Negative | 1299076 - 1299678 | 21099.9 |
| protein of unknown function | SAMN05421854_1011300 | Not Available | Negative | 1299695 - 1300306 | 22438.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
