Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421854_1011251 | Not Available | Negative | 1255139 - 1255423 | 9931.84 |
| hypothetical protein | SAMN05421854_1011252 | Not Available | Negative | 1255688 - 1256224 | 19416.9 |
| hypothetical protein | SAMN05421854_1011253 | Not Available | Positive | 1256536 - 1257234 | 25081.1 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN05421854_1011254 | Not Available | Negative | 1257231 - 1257866 | 22853.2 |
| acyl-coa reductase | SAMN05421854_1011255 | Not Available | Positive | 1258067 - 1259563 | 52705.9 |
| fmn-dependent dehydrogenase, includes l-lactate dehydrogenase and type ii isopentenyl diphosphate isomerase | SAMN05421854_1011256 | Not Available | Positive | 1259573 - 1260736 | 41113.1 |
| hypothetical protein | SAMN05421854_1011257 | Not Available | Negative | 1260741 - 1261130 | 14356.7 |
| alpha-1,2-mannosyltransferase | SAMN05421854_1011258 | Not Available | Positive | 1261181 - 1262365 | 42025.0 |
| hypothetical protein | SAMN05421854_1011259 | Not Available | Negative | 1262362 - 1263174 | 28838.4 |
| choline dehydrogenase | SAMN05421854_1011260 | Not Available | Negative | 1263171 - 1264751 | 57061.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
