Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN05421854_1011231 | Not Available | Positive | 1237561 - 1238166 | 21709.1 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05421854_1011232 | Not Available | Negative | 1238173 - 1238586 | 14850.7 |
| hd domain-containing protein | SAMN05421854_1011233 | Not Available | Negative | 1238600 - 1239277 | 24065.6 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN05421854_1011234 | Not Available | Positive | 1239329 - 1240261 | 33731.3 |
| dna-binding transcriptional regulator, fadr family | SAMN05421854_1011235 | Not Available | Negative | 1240237 - 1240947 | 25535.5 |
| 6-phosphogluconolactonase, cycloisomerase 2 family | SAMN05421854_1011236 | Not Available | Negative | 1240944 - 1241930 | 34012.1 |
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase | SAMN05421854_1011237 | Not Available | Negative | 1241927 - 1242541 | 20740.9 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421854_1011238 | Not Available | Positive | 1242622 - 1243302 | 23493.7 |
| galactonate dehydratase | SAMN05421854_1011239 | Not Available | Positive | 1243311 - 1244459 | 41225.4 |
| adenylosuccinate lyase | SAMN05421854_1011240 | Not Available | Positive | 1244494 - 1245921 | 52059.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
