Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ppe family protein | SAMN05421854_1011221 | Not Available | Positive | 1228981 - 1230582 | 53711.1 |
| espg family protein | SAMN05421854_1011222 | Not Available | Positive | 1230579 - 1231337 | 27054.0 |
| hypothetical protein | SAMN05421854_1011223 | Not Available | Positive | 1231525 - 1231836 | 11245.2 |
| wxg100 family type vii secretion target | SAMN05421854_1011224 | Not Available | Positive | 1231859 - 1232992 | 38896.9 |
| aspartate/methionine/tyrosine aminotransferase | SAMN05421854_1011225 | Not Available | Positive | 1233034 - 1234200 | 41594.3 |
| hypothetical protein | SAMN05421854_1011226 | Not Available | Positive | 1234324 - 1234509 | 6572.5 |
| putative hydrolase of the had superfamily | SAMN05421854_1011227 | Not Available | Negative | 1234576 - 1235181 | 21707.6 |
| l-threonine aldolase | SAMN05421854_1011228 | Not Available | Negative | 1235174 - 1236190 | 35352.5 |
| rna polymerase sigma-70 factor, sigma-e family | SAMN05421854_1011229 | Not Available | Positive | 1236332 - 1236841 | 19220.8 |
| hypothetical protein | SAMN05421854_1011230 | Not Available | Positive | 1236834 - 1237523 | 23055.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
