Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421854_1011201 | Not Available | Positive | 1205381 - 1205704 | 12172.2 |
| hypothetical protein | SAMN05421854_1011202 | Not Available | Negative | 1206547 - 1207725 | 42854.9 |
| protein of unknown function | SAMN05421854_1011203 | Not Available | Positive | 1207951 - 1208361 | 14458.8 |
| helix-turn-helix domain-containing protein | SAMN05421854_1011204 | Not Available | Positive | 1208487 - 1209350 | 30879.4 |
| acetyltransferase (gnat) domain-containing protein | SAMN05421854_1011205 | Not Available | Negative | 1209347 - 1209853 | 18314.8 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05421854_1011206 | Not Available | Negative | 1209919 - 1211208 | 45745.6 |
| predicted arabinose efflux permease, mfs family | SAMN05421854_1011207 | Not Available | Negative | 1211427 - 1212686 | 43721.2 |
| fad-nad(p)-binding | SAMN05421854_1011208 | Not Available | Positive | 1213004 - 1214881 | 68287.1 |
| glycosyl hydrolases family 18 | SAMN05421854_1011209 | Not Available | Negative | 1214871 - 1215770 | 32048.6 |
| protein of unknown function | SAMN05421854_1011210 | Not Available | Negative | 1215819 - 1216457 | 22907.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
