Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, dha2 family, multidrug resistance protein | SAMN05421854_1011181 | Not Available | Positive | 1185668 - 1187182 | 52265.0 |
| transcriptional regulator, tetr family | SAMN05421854_1011182 | Not Available | Negative | 1188010 - 1188585 | 20084.8 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421854_1011183 | Not Available | Positive | 1188676 - 1189557 | 29756.0 |
| methyltransferase domain-containing protein | SAMN05421854_1011184 | Not Available | Positive | 1189632 - 1190213 | 20822.4 |
| glycolate oxidase | SAMN05421854_1011185 | Not Available | Positive | 1190264 - 1191658 | 48656.2 |
| membrane-associated protein | SAMN05421854_1011186 | Not Available | Negative | 1191721 - 1192425 | 25811.0 |
| hypothetical protein | SAMN05421854_1011187 | Not Available | Negative | 1192566 - 1193165 | 18696.6 |
| n-acetylglucosamine-6-phosphate deacetylase | SAMN05421854_1011188 | Not Available | Negative | 1193198 - 1194388 | 41254.2 |
| rna polymerase sigma-70 factor, sigma-e family | SAMN05421854_1011189 | Not Available | Negative | 1194441 - 1195016 | 20878.1 |
| hypothetical protein | SAMN05421854_1011190 | Not Available | Positive | 1195214 - 1195492 | 10358.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
