Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421854_1011171 | Not Available | Positive | 1176984 - 1177619 | 23472.1 |
| hypothetical protein | SAMN05421854_1011172 | Not Available | Positive | 1177627 - 1178145 | 19530.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421854_1011173 | Not Available | Positive | 1178158 - 1178901 | 25290.8 |
| glyoxylase i family protein | SAMN05421854_1011174 | Not Available | Positive | 1179034 - 1179444 | 15389.9 |
| membrane-associated protein | SAMN05421854_1011175 | Not Available | Negative | 1179449 - 1180126 | 24263.9 |
| por secretion system c-terminal sorting domain-containing protein | SAMN05421854_1011176 | Not Available | Negative | 1180292 - 1181116 | 29126.7 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05421854_1011177 | Not Available | Negative | 1181113 - 1183731 | 90970.3 |
| dna-binding transcriptional regulator, marr family | SAMN05421854_1011178 | Not Available | Negative | 1183728 - 1184255 | 19232.6 |
| ppox class probable f420-dependent enzyme | SAMN05421854_1011179 | Not Available | Positive | 1184507 - 1184932 | 15663.5 |
| transcriptional regulator, tetr family | SAMN05421854_1011180 | Not Available | Negative | 1184967 - 1185578 | 21998.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
