Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinosyltransferase c | SAMN05421854_1011151 | Not Available | Negative | 1156754 - 1159966 | 113611.0 |
| hypothetical protein | SAMN05421854_1011152 | Not Available | Negative | 1160189 - 1161070 | 30241.2 |
| hypothetical protein | SAMN05421854_1011153 | Not Available | Positive | 1161120 - 1161887 | 27480.2 |
| putative abc transport system atp-binding protein | SAMN05421854_1011154 | Not Available | Positive | 1161966 - 1162712 | 26416.0 |
| putative abc transport system permease protein | SAMN05421854_1011155 | Not Available | Positive | 1162712 - 1165150 | 83392.9 |
| orotate phosphoribosyltransferase | SAMN05421854_1011156 | Not Available | Positive | 1165167 - 1165754 | 20649.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421854_1011157 | Not Available | Positive | 1165847 - 1166401 | 20799.8 |
| hypothetical protein | SAMN05421854_1011158 | Not Available | Positive | 1166392 - 1166949 | 19988.6 |
| uncharacterized conserved protein ylou, alkaline shock protein (asp23) family | SAMN05421854_1011159 | Not Available | Positive | 1166946 - 1167308 | 12811.4 |
| hypothetical protein | SAMN05421854_1011160 | Not Available | Positive | 1167305 - 1167607 | 10405.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
