Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperonin groes | SAMN05421854_1011091 | Not Available | Positive | 1093731 - 1094063 | 12205.6 |
| vancomycin resistance protein yoar, contains peptidoglycan-binding and vanw domains | SAMN05421854_1011092 | Not Available | Positive | 1094088 - 1095926 | 63735.6 |
| hypothetical protein | SAMN05421854_1011093 | Not Available | Negative | 1095916 - 1096248 | 12270.4 |
| 5'-nucleotidase | SAMN05421854_1011094 | Not Available | Negative | 1096354 - 1098042 | 58514.1 |
| hypothetical protein | SAMN05421854_1011095 | Not Available | Positive | 1098212 - 1098337 | 4562.57 |
| glycopeptide antibiotics resistance protein | SAMN05421854_1011096 | Not Available | Positive | 1098441 - 1099082 | 23352.7 |
| hypothetical protein | SAMN05421854_1011097 | Not Available | Negative | 1099023 - 1099199 | 6278.97 |
| methyltransferase domain-containing protein | SAMN05421854_1011098 | Not Available | Negative | 1099266 - 1099904 | 22817.2 |
| g/u mismatch-specific uracil-dna glycosylase | SAMN05421854_1011099 | Not Available | Positive | 1099934 - 1100512 | 20789.9 |
| two component transcriptional regulator, luxr family | SAMN05421854_1011100 | Not Available | Positive | 1100758 - 1101546 | 28283.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
