Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex transport system permease protein | SAMN05421854_1011081 | Not Available | Positive | 1081637 - 1082653 | 34717.5 |
| iron complex transport system permease protein | SAMN05421854_1011082 | Not Available | Positive | 1082650 - 1083630 | 33117.7 |
| hypothetical protein | SAMN05421854_1011083 | Not Available | Negative | 1083698 - 1084639 | 34655.5 |
| polar amino acid transport system substrate-binding protein | SAMN05421854_1011084 | Not Available | Positive | 1085075 - 1085986 | 31115.9 |
| polar amino acid transport system permease protein | SAMN05421854_1011085 | Not Available | Positive | 1086009 - 1086968 | 34861.2 |
| polar amino acid transport system atp-binding protein | SAMN05421854_1011086 | Not Available | Positive | 1086965 - 1087738 | 28328.6 |
| hypothetical protein | SAMN05421854_1011087 | Not Available | Positive | 1088378 - 1090681 | 84106.5 |
| polyketide cyclase / dehydrase and lipid transport | SAMN05421854_1011088 | Not Available | Positive | 1090699 - 1091154 | 16018.0 |
| hypothetical protein | SAMN05421854_1011089 | Not Available | Negative | 1091158 - 1091730 | 21615.3 |
| thiol-disulfide isomerase or thioredoxin | SAMN05421854_1011090 | Not Available | Positive | 1091900 - 1093729 | 65101.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
