Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate kinase | SAMN05421854_1011071 | Not Available | Negative | 1070257 - 1070754 | 18769.7 |
| hypothetical protein | SAMN05421854_1011072 | Not Available | Negative | 1070771 - 1071955 | 41911.6 |
| abc transporter | SAMN05421854_1011073 | Not Available | Negative | 1071952 - 1072536 | 20473.2 |
| atp-binding cassette, subfamily b | SAMN05421854_1011074 | Not Available | Negative | 1072568 - 1074526 | 71317.4 |
| transcriptional regulator, tetr family | SAMN05421854_1011075 | Not Available | Negative | 1074523 - 1075095 | 20720.1 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN05421854_1011076 | Not Available | Negative | 1075204 - 1076523 | 45845.0 |
| pyruvate dehydrogenase e1 component beta subunit | SAMN05421854_1011077 | Not Available | Negative | 1076540 - 1077532 | 35705.9 |
| pyruvate dehydrogenase e1 component alpha subunit | SAMN05421854_1011078 | Not Available | Negative | 1077532 - 1078737 | 44945.3 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN05421854_1011079 | Not Available | Positive | 1079125 - 1080519 | 49328.3 |
| iron complex transport system substrate-binding protein | SAMN05421854_1011080 | Not Available | Negative | 1080560 - 1081573 | 36179.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
