Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein ypha, doxx/surf4 family | SAMN05421854_1011061 | Not Available | Positive | 1062028 - 1062534 | 17681.6 |
| acetyl-coa c-acetyltransferase | SAMN05421854_1011062 | Not Available | Negative | 1062589 - 1063878 | 45105.0 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05421854_1011063 | Not Available | Positive | 1063974 - 1065308 | 46050.4 |
| maoc like domain-containing protein | SAMN05421854_1011064 | Not Available | Positive | 1065312 - 1066148 | 30747.0 |
| transcriptional regulator, tetr family | SAMN05421854_1011065 | Not Available | Negative | 1066137 - 1066796 | 24047.6 |
| scp-2 sterol transfer family protein | SAMN05421854_1011066 | Not Available | Positive | 1066918 - 1067562 | 23194.9 |
| scp-2 sterol transfer family protein | SAMN05421854_1011067 | Not Available | Positive | 1067593 - 1068171 | 20890.8 |
| dna (cytosine-5)-methyltransferase 1 | SAMN05421854_1011068 | Not Available | Negative | 1068168 - 1069283 | 40300.2 |
| t/g mismatch-specific endonuclease | SAMN05421854_1011069 | Not Available | Negative | 1069294 - 1069722 | 16487.8 |
| upf0716 protein fxsa | SAMN05421854_1011070 | Not Available | Negative | 1069735 - 1070202 | 16789.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
