Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine38-40 synthase | SAMN05421854_10171 | Not Available | Negative | 73046 - 73876 | 30322.9 |
| large subunit ribosomal protein l17 | SAMN05421854_10172 | Not Available | Negative | 73955 - 74500 | 19312.0 |
| dna-directed rna polymerase subunit alpha | SAMN05421854_10173 | Not Available | Negative | 74543 - 75616 | 38246.2 |
| small subunit ribosomal protein s4 | SAMN05421854_10174 | Not Available | Negative | 75718 - 76323 | 23252.3 |
| ssu ribosomal protein s11p | SAMN05421854_10175 | Not Available | Negative | 76347 - 76751 | 14284.2 |
| hypothetical protein | SAMN05421854_10176 | Not Available | Negative | 76770 - 76955 | 6646.08 |
| small subunit ribosomal protein s13 | SAMN05421854_10177 | Not Available | Negative | 76952 - 77332 | 14410.6 |
| large subunit ribosomal protein l36 | SAMN05421854_10178 | Not Available | Negative | 77531 - 77644 | 4417.7 |
| bacterial translation initiation factor 1 (bif-1) | SAMN05421854_10179 | Not Available | Negative | 77682 - 77903 | 8475.43 |
| methionyl aminopeptidase | SAMN05421854_10180 | Not Available | Negative | 78156 - 78980 | 29142.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
