Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421854_1011040 | Not Available | Positive | 1044817 - 1045125 | 11147.2 |
| hypothetical protein | SAMN05421854_1011041 | Not Available | Positive | 1045219 - 1045914 | 23644.4 |
| phosphoenolpyruvate carboxykinase (gtp) | SAMN05421854_1011042 | Not Available | Positive | 1046315 - 1048135 | 67051.2 |
| probable f420-dependent oxidoreductase, msmeg_2516 family | SAMN05421854_1011043 | Not Available | Positive | 1048221 - 1049114 | 32130.9 |
| abc transporter | SAMN05421854_1011044 | Not Available | Positive | 1049114 - 1049716 | 21747.1 |
| hypothetical protein | SAMN05421854_1011045 | Not Available | Positive | 1049713 - 1050978 | 44139.9 |
| endou nuclease | SAMN05421854_1011046 | Not Available | Positive | 1051025 - 1051600 | 21481.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421854_1011047 | Not Available | Negative | 1051605 - 1052318 | 24486.1 |
| dna-binding transcriptional regulator, lysr family | SAMN05421854_1011048 | Not Available | Positive | 1052394 - 1053290 | 32071.5 |
| helix-turn-helix domain-containing protein | SAMN05421854_1011049 | Not Available | Negative | 1053345 - 1053632 | 10072.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
