Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, padr family | SAMN05421854_1011010 | Not Available | Positive | 1012696 - 1013265 | 22034.3 |
| l-myo-inositol-1-phosphate synthase | SAMN05421854_1011011 | Not Available | Positive | 1013331 - 1014419 | 39844.0 |
| methyltransferase, tigr00027 family | SAMN05421854_1011012 | Not Available | Negative | 1014490 - 1015347 | 31207.0 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05421854_1011013 | Not Available | Negative | 1015455 - 1016093 | 22521.7 |
| dna-binding transcriptional regulator, marr family | SAMN05421854_1011014 | Not Available | Positive | 1016179 - 1016664 | 18110.9 |
| predicted arabinose efflux permease, mfs family | SAMN05421854_1011015 | Not Available | Positive | 1016661 - 1017881 | 41859.2 |
| hypothetical protein | SAMN05421854_1011016 | Not Available | Positive | 1018042 - 1020120 | 74146.4 |
| conserved repeat domain-containing protein | SAMN05421854_1011017 | Not Available | Positive | 1020235 - 1021572 | 45214.6 |
| arabinofuranosyltransferase | SAMN05421854_1011018 | Not Available | Positive | 1021657 - 1023354 | 60889.5 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05421854_1011019 | Not Available | Positive | 1023380 - 1024057 | 23865.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
