Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421854_101980 | Not Available | Positive | 979312 - 980340 | 34492.9 |
| hypothetical protein | SAMN05421854_101981 | Not Available | Positive | 980533 - 983661 | 100103.0 |
| 4,5-dopa dioxygenase extradiol | SAMN05421854_101982 | Not Available | Negative | 983744 - 984523 | 28347.6 |
| hypothetical protein | SAMN05421854_101983 | Not Available | Positive | 984609 - 985166 | 20033.3 |
| predicted arabinose efflux permease, mfs family | SAMN05421854_101984 | Not Available | Negative | 985105 - 986337 | 41190.4 |
| dna-binding transcriptional regulator, arsr family | SAMN05421854_101985 | Not Available | Positive | 986426 - 986785 | 13548.3 |
| short-chain dehydrogenase | SAMN05421854_101986 | Not Available | Negative | 986757 - 987653 | 31877.4 |
| dna-binding transcriptional regulator, acrr family | SAMN05421854_101987 | Not Available | Positive | 987694 - 988299 | 21044.2 |
| hypothetical protein | SAMN05421854_101988 | Not Available | Positive | 988366 - 988662 | 10743.8 |
| nadph:quinone reductase | SAMN05421854_101989 | Not Available | Negative | 989019 - 989984 | 33212.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
