Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421854_101970 | Not Available | Positive | 969064 - 969801 | 24334.0 |
| transcriptional regulator, tetr family | SAMN05421854_101971 | Not Available | Negative | 969798 - 970535 | 27198.7 |
| ribokinase | SAMN05421854_101972 | Not Available | Positive | 970879 - 971751 | 29070.2 |
| hypothetical protein | SAMN05421854_101973 | Not Available | Positive | 971780 - 972511 | 27561.1 |
| phosphotransferase system, enzyme i, ptsi | SAMN05421854_101974 | Not Available | Positive | 972504 - 974177 | 55668.1 |
| protein of unknown function | SAMN05421854_101975 | Not Available | Negative | 974235 - 974897 | 23800.2 |
| hypothetical protein | SAMN05421854_101976 | Not Available | Positive | 974970 - 976019 | 35398.2 |
| two component transcriptional regulator, luxr family | SAMN05421854_101977 | Not Available | Negative | 976022 - 976678 | 23402.8 |
| signal transduction histidine kinase | SAMN05421854_101978 | Not Available | Negative | 976675 - 977811 | 40209.7 |
| predicted purr-regulated permease perm | SAMN05421854_101979 | Not Available | Negative | 977808 - 979013 | 41875.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
