Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rubida |
| Strain | strain DSM 44637 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis rubida strain DSM 44637 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vii secretion integral membrane protein eccd | SAMN05421854_10161 | Not Available | Positive | 63350 - 64714 | 46675.7 |
| membrane-anchored mycosin mycp | SAMN05421854_10162 | Not Available | Positive | 64723 - 66381 | 56317.9 |
| hypothetical protein | SAMN05421854_10163 | Not Available | Negative | 66494 - 67519 | 35200.6 |
| hypothetical protein | SAMN05421854_10164 | Not Available | Negative | 67516 - 67860 | 11205.9 |
| type vii secretion protein eccb | SAMN05421854_10165 | Not Available | Negative | 67916 - 69556 | 57050.9 |
| type vii secretion protein ecce | SAMN05421854_10166 | Not Available | Positive | 70316 - 71548 | 43055.4 |
| hypothetical protein | SAMN05421854_10167 | Not Available | Positive | 71545 - 71634 | 2994.72 |
| hypothetical protein | SAMN05421854_10168 | Not Available | Positive | 71631 - 72350 | 25725.3 |
| death on curing protein | SAMN05421854_10169 | Not Available | Negative | 72403 - 72786 | 13895.7 |
| hypothetical protein | SAMN05421854_10170 | Not Available | Negative | 72783 - 72986 | 7472.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
