Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. JW11 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957057 bp
Thymine Count
913011 bp
Guanine Count
636443 bp
Cytosine Count
554743 bp
Genome Length
3061734 bp
Protein-coding Genes
2773 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-rhamnosidase | SAMN05216351_101410 | Not Available | Positive | 488483 - 490714 | 84213.0 |
| arac-type dna-binding protein | SAMN05216351_101411 | Not Available | Negative | 490734 - 491648 | 35281.4 |
| l-arabinose isomerase | SAMN05216351_101412 | Not Available | Positive | 491809 - 493230 | 51916.3 |
| rhamnulose-1-phosphate aldolase | SAMN05216351_101413 | Not Available | Positive | 493244 - 494089 | 31725.1 |
| rhamnulokinase | SAMN05216351_101414 | Not Available | Positive | 494089 - 495462 | 50550.5 |
| transcriptional regulator, tetr family | SAMN05216351_101415 | Not Available | Positive | 495523 - 496074 | 21779.6 |
| lactaldehyde reductase | SAMN05216351_101416 | Not Available | Positive | 496231 - 497379 | 41143.4 |
| pyruvate kinase | SAMN05216351_101417 | Not Available | Positive | 497566 - 498981 | 51488.2 |
| l,d-transpeptidase catalytic domain | SAMN05216351_101418 | Not Available | Positive | 499258 - 500118 | 31641.4 |
| endonuclease-3 | SAMN05216351_101419 | Not Available | Negative | 500162 - 500794 | 23501.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
