Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. JW11 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957057 bp
Thymine Count
913011 bp
Guanine Count
636443 bp
Cytosine Count
554743 bp
Genome Length
3061734 bp
Protein-coding Genes
2773 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport system substrate-binding protein | SAMN05216351_11428 | Not Available | Negative | 2490190 - 2491377 | 41719.1 |
| 16s rrna pseudouridine516 synthase | SAMN05216351_11429 | Not Available | Negative | 2491500 - 2492195 | 25861.2 |
| methionyl aminopeptidase | SAMN05216351_11430 | Not Available | Negative | 2492195 - 2493067 | 32000.3 |
| hypothetical protein | SAMN05216351_11431 | Not Available | Negative | 2493087 - 2493797 | 27759.8 |
| cell wall-associated hydrolase, nlpc family | SAMN05216351_11432 | Not Available | Negative | 2493794 - 2494897 | 39539.7 |
| uncharacterized protein veg | SAMN05216351_11433 | Not Available | Negative | 2495107 - 2495346 | 9113.88 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN05216351_11434 | Not Available | Positive | 2495668 - 2496399 | 27380.1 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMN05216351_11435 | Not Available | Negative | 2496435 - 2497814 | 49880.2 |
| d-alanine-d-alanine ligase | SAMN05216351_11436 | Not Available | Negative | 2497839 - 2498879 | 37844.2 |
| transcriptional regulator, contains xre-family hth domain | SAMN05216351_11437 | Not Available | Negative | 2498970 - 2499845 | 33874.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
