Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. JW11 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957057 bp
Thymine Count
913011 bp
Guanine Count
636443 bp
Cytosine Count
554743 bp
Genome Length
3061734 bp
Protein-coding Genes
2773 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-alpha-glucan branching enzyme | SAMN05216351_11378 | Not Available | Positive | 2458379 - 2460277 | 73604.9 |
| hypothetical protein | SAMN05216351_11379 | Not Available | Positive | 2460338 - 2461555 | 46722.9 |
| colicin v production protein | SAMN05216351_11380 | Not Available | Positive | 2461564 - 2462235 | 24609.6 |
| ribose 5-phosphate isomerase b | SAMN05216351_1141 | Not Available | Negative | 2462700 - 2463161 | 16824.2 |
| diguanylate cyclase/phosphodiesterase | SAMN05216351_1142 | Not Available | Positive | 2463363 - 2465261 | 73073.2 |
| protein-tyrosine phosphatase | SAMN05216351_1143 | Not Available | Negative | 2465293 - 2465745 | 17714.2 |
| hypothetical protein | SAMN05216351_1144 | Not Available | Negative | 2465758 - 2466366 | 23143.9 |
| hypothetical protein | SAMN05216351_1145 | Not Available | Negative | 2466451 - 2467086 | 22829.6 |
| signal transduction histidine kinase | SAMN05216351_1146 | Not Available | Negative | 2467165 - 2469744 | 98051.3 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05216351_1147 | Not Available | Negative | 2469763 - 2470464 | 25960.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
