Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. JW11 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957057 bp
Thymine Count
913011 bp
Guanine Count
636443 bp
Cytosine Count
554743 bp
Genome Length
3061734 bp
Protein-coding Genes
2773 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s binding domain-containing protein | SAMN05216351_101167 | Not Available | Positive | 195132 - 195713 | 22716.5 |
| hypothetical protein | SAMN05216351_101168 | Not Available | Negative | 195769 - 196188 | 16473.9 |
| protein of unknown function | SAMN05216351_101169 | Not Available | Positive | 196334 - 196684 | 12899.7 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05216351_101170 | Not Available | Negative | 196697 - 197908 | 45981.8 |
| nanornase/pap phosphatase, hydrolyzes c-di-amp and oligornas | SAMN05216351_101171 | Not Available | Positive | 198155 - 199690 | 57920.0 |
| hypothetical protein | SAMN05216351_101172 | Not Available | Negative | 199789 - 200151 | 13166.4 |
| oligoendopeptidase f | SAMN05216351_101173 | Not Available | Positive | 200285 - 202084 | 68522.9 |
| dna polymerase iii catalytic subunit, dnae type | SAMN05216351_101174 | Not Available | Positive | 202161 - 205703 | 133030.0 |
| 6-phosphofructokinase | SAMN05216351_101175 | Not Available | Positive | 205805 - 206791 | 35425.5 |
| rna methyltransferase, trmh family | SAMN05216351_101176 | Not Available | Positive | 206775 - 207581 | 29131.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
