Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. JW11 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957057 bp
Thymine Count
913011 bp
Guanine Count
636443 bp
Cytosine Count
554743 bp
Genome Length
3061734 bp
Protein-coding Genes
2773 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | SAMN05216351_10878 | Not Available | Negative | 1935718 - 1937190 | 54207.2 |
| diaminopimelate epimerase | SAMN05216351_10879 | Not Available | Negative | 1937193 - 1938026 | 30581.3 |
| arac-type dna-binding protein | SAMN05216351_10880 | Not Available | Positive | 1938181 - 1939038 | 32471.3 |
| nitroreductase | SAMN05216351_10881 | Not Available | Negative | 1939043 - 1939852 | 30510.1 |
| predicted nuclease of the rnase h fold, hicb family | SAMN05216351_10882 | Not Available | Negative | 1940186 - 1940539 | 13395.0 |
| hypothetical protein | SAMN05216351_10883 | Not Available | Negative | 1940546 - 1940806 | 10056.4 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN05216351_10884 | Not Available | Negative | 1940889 - 1941683 | 30068.2 |
| preprotein translocase subunit seca | SAMN05216351_10885 | Not Available | Negative | 1941738 - 1944308 | 97752.4 |
| fha domain-containing protein | SAMN05216351_10886 | Not Available | Negative | 1944406 - 1945536 | 44033.6 |
| hypothetical protein | SAMN05216351_10887 | Not Available | Negative | 1945542 - 1945748 | 7715.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
