Pseudobutyrivibrio sp. JW11

Gram-positive

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Pseudobutyrivibrio

Description

Pseudobutyrivibrio sp. JW11 is a Gram-positive bacterium characterized by the presence of flagella, which enables motility. This trait is significant for its ecological interactions, as flagellated bacteria can navigate their environments more effectively, potentially influencing their role in microbial communities. The organism has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation to its environment. The genomic data for Pseudobutyrivibrio sp. JW11 is accessible through the accession number FOWB00000000.1. This accession provides a basis for further genetic and functional studies, allowing researchers to explore its metabolic capabilities and ecological roles in greater detail. In a broader ecological context, Pseudobutyrivibrio sp. JW11 may contribute to nutrient cycling and the stability of microbial communities, particularly in environments where flagellated bacteria play a key role in organic matter decomposition or in symbiotic relationships with larger organisms. Understanding its traits and potential functions can enhance our comprehension of microbial dynamics in various ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusPseudobutyrivibrio
SpeciesPseudobutyrivibrio sp. JW11
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudobutyrivibrio sp. JW11 genome assembly, contig:

Gene Summary

Adenine Count

957057 bp

Thymine Count

913011 bp

Guanine Count

636443 bp

Cytosine Count

554743 bp

Genome Length

3061734 bp

Protein-coding Genes

2773 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant)SAMN05216351_103241Not AvailableNegative1121237 - 112314772797.1
branched chain amino acid aminotransferase apoenzymeSAMN05216351_103242Not AvailablePositive1123370 - 112443439993.2
diguanylate cyclase (ggdef) domain-containing proteinSAMN05216351_103243Not AvailablePositive1124413 - 1127049100313.0
glycine hydroxymethyltransferaseSAMN05216351_103244Not AvailablePositive1127065 - 112831545395.5
amino acid-binding domain sensor hybrid histidine kinaseSAMN05216351_103245Not AvailablePositive1128353 - 113071087698.4
collagen binding domain-containing proteinSAMN05216351_103246Not AvailablePositive1130897 - 1135339158682.0
sortase aSAMN05216351_103247Not AvailablePositive1135329 - 113591621766.9
transglutaminase-like superfamily proteinSAMN05216351_103248Not AvailableNegative1135949 - 113676130329.5
hydrogenase nickel incorporation protein hypbSAMN05216351_103249Not AvailablePositive1137039 - 113771024678.4
nadph-dependent glutamate synthase beta chainSAMN05216351_103250Not AvailablePositive1137782 - 1140565102774.0

Displaying genes 1011 – 1020 of 2828 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.