Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. JW11 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957057 bp
Thymine Count
913011 bp
Guanine Count
636443 bp
Cytosine Count
554743 bp
Genome Length
3061734 bp
Protein-coding Genes
2773 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05216351_103241 | Not Available | Negative | 1121237 - 1123147 | 72797.1 |
| branched chain amino acid aminotransferase apoenzyme | SAMN05216351_103242 | Not Available | Positive | 1123370 - 1124434 | 39993.2 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05216351_103243 | Not Available | Positive | 1124413 - 1127049 | 100313.0 |
| glycine hydroxymethyltransferase | SAMN05216351_103244 | Not Available | Positive | 1127065 - 1128315 | 45395.5 |
| amino acid-binding domain sensor hybrid histidine kinase | SAMN05216351_103245 | Not Available | Positive | 1128353 - 1130710 | 87698.4 |
| collagen binding domain-containing protein | SAMN05216351_103246 | Not Available | Positive | 1130897 - 1135339 | 158682.0 |
| sortase a | SAMN05216351_103247 | Not Available | Positive | 1135329 - 1135916 | 21766.9 |
| transglutaminase-like superfamily protein | SAMN05216351_103248 | Not Available | Negative | 1135949 - 1136761 | 30329.5 |
| hydrogenase nickel incorporation protein hypb | SAMN05216351_103249 | Not Available | Positive | 1137039 - 1137710 | 24678.4 |
| nadph-dependent glutamate synthase beta chain | SAMN05216351_103250 | Not Available | Positive | 1137782 - 1140565 | 102774.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
