Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN04487831_102392 | Not Available | Positive | 1086470 - 1087123 | 24726.6 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN04487831_102393 | Not Available | Positive | 1087133 - 1088344 | 45161.7 |
| protein of unknown function | SAMN04487831_102394 | Not Available | Positive | 1088371 - 1090230 | 70271.1 |
| hypothetical protein | SAMN04487831_102395 | Not Available | Positive | 1090337 - 1091071 | 29717.3 |
| hypothetical protein | SAMN04487831_102396 | Not Available | Negative | 1091115 - 1092197 | 36855.5 |
| hypothetical protein | SAMN04487831_102397 | Not Available | Positive | 1092442 - 1094721 | 83506.4 |
| thioredoxin reductase (nadph) | SAMN04487831_102398 | Not Available | Positive | 1094932 - 1095792 | 30513.4 |
| thioredoxin | SAMN04487831_102399 | Not Available | Positive | 1095837 - 1096148 | 11391.8 |
| dna-binding transcriptional regulator, marr family | SAMN04487831_102400 | Not Available | Positive | 1096205 - 1096648 | 16990.8 |
| hypothetical protein | SAMN04487831_102401 | Not Available | Negative | 1096652 - 1097806 | 43301.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
