Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein (mcp) signalling domain-containing protein | SAMN04487831_102382 | Not Available | Positive | 1069152 - 1070921 | 63983.7 |
| alpha-glucosidase, glycosyl hydrolase family gh31 | SAMN04487831_102383 | Not Available | Positive | 1071097 - 1073349 | 86363.1 |
| transcriptional regulator, laci family | SAMN04487831_102384 | Not Available | Positive | 1073430 - 1074443 | 37224.9 |
| arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein | SAMN04487831_102385 | Not Available | Positive | 1074711 - 1075979 | 45128.6 |
| arabinogalactan oligomer / maltooligosaccharide transport system permease protein | SAMN04487831_102386 | Not Available | Positive | 1075991 - 1077310 | 49142.9 |
| arabinogalactan oligomer / maltooligosaccharide transport system permease protein | SAMN04487831_102387 | Not Available | Positive | 1077310 - 1078572 | 46702.5 |
| alpha-amylase | SAMN04487831_102388 | Not Available | Positive | 1078763 - 1082620 | 141023.0 |
| transposase dde domain-containing protein | SAMN04487831_102389 | Not Available | Positive | 1082844 - 1084160 | 51044.8 |
| hypothetical protein | SAMN04487831_102390 | Not Available | Positive | 1084559 - 1085008 | 16731.9 |
| putative efflux protein, mate family | SAMN04487831_102391 | Not Available | Positive | 1085116 - 1086477 | 49073.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
