Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitt/taut family transport system permease protein | SAMN04487831_102352 | Not Available | Positive | 1034503 - 1035285 | 28113.6 |
| nitt/taut family transport system atp-binding protein | SAMN04487831_102353 | Not Available | Positive | 1035285 - 1036058 | 28768.9 |
| carbon-monoxide dehydrogenase catalytic subunit | SAMN04487831_102354 | Not Available | Positive | 1036079 - 1038190 | 77127.5 |
| hypothetical protein | SAMN04487831_102355 | Not Available | Positive | 1038462 - 1039349 | 30922.6 |
| hypothetical protein | SAMN04487831_102356 | Not Available | Positive | 1040288 - 1040560 | 9968.05 |
| hypothetical protein | SAMN04487831_102357 | Not Available | Positive | 1040690 - 1041337 | 24969.7 |
| fic/doc family protein | SAMN04487831_102358 | Not Available | Negative | 1041379 - 1042275 | 34428.8 |
| hypothetical protein | SAMN04487831_102359 | Not Available | Positive | 1042486 - 1042794 | 11151.7 |
| zinc transport system substrate-binding protein | SAMN04487831_102360 | Not Available | Positive | 1042877 - 1043938 | 38881.5 |
| zinc transport system atp-binding protein | SAMN04487831_102361 | Not Available | Positive | 1043948 - 1044616 | 24227.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
