Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. UC1225 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1032307 bp
Thymine Count
1029883 bp
Guanine Count
649089 bp
Cytosine Count
660589 bp
Genome Length
3371868 bp
Protein-coding Genes
3042 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhac | SAMN04487831_102342 | Not Available | Positive | 1023014 - 1024324 | 46132.7 |
| gaf domain-containing protein | SAMN04487831_102343 | Not Available | Positive | 1024351 - 1024806 | 16379.5 |
| l-lactate dehydrogenase | SAMN04487831_102344 | Not Available | Positive | 1024904 - 1025851 | 33708.5 |
| enolase | SAMN04487831_102345 | Not Available | Positive | 1026032 - 1027330 | 46156.9 |
| formate/nitrite transporter foca, fnt family | SAMN04487831_102346 | Not Available | Positive | 1027419 - 1028036 | 22687.6 |
| arabinoxylan arabinofuranohydrolase | SAMN04487831_102347 | Not Available | Positive | 1028167 - 1030410 | 80273.2 |
| 2'-5' rna ligase | SAMN04487831_102348 | Not Available | Positive | 1030690 - 1031220 | 19699.9 |
| hypothetical protein | SAMN04487831_102349 | Not Available | Negative | 1031296 - 1032426 | 42101.9 |
| hypothetical protein | SAMN04487831_102350 | Not Available | Positive | 1032660 - 1033418 | 27129.7 |
| nitt/taut family transport system substrate-binding protein | SAMN04487831_102351 | Not Available | Positive | 1033577 - 1034503 | 32921.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
